Browsing by Author "Onlu, H."

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Investigation of Some Physiological and Biochemical Parameters in Pseudomonas Syringae-Infected Tomato Plants
(Asian Journal of Chemistry, 2010) Berber, I.; Onlu, H.; Ekin, S.; Battal, P.; Erez, M. E.
In the present study, the levels of manganese, magnesium, plant hormones (indole-3-acetic acid and abscisic acid), sugars (fructose and maltose), total chlorophyll and carotenoid contents in tomato plants following inoculation with Pseudomonas syringae pv. tomato were investigated. The trace element analysis showed that the levels of Mn significantly decreased in bacterium-infected tomato plants, comparing to the healthy plants. In contrary, the content of Mg in the bacterium-infected plants was higher than the uninfected plants. Manganese deficient in the bacterium-infected plants might be an important indicator against attempted bacterial infection. The results of phytohormone analysis showed that there may be an opposite relationship between the concentrations of endogenous indole-3-acetic acid and abscisic acid and the enhance disease resistance in bacterium-infected tomato plants. Therefore, it seems that indole-3-acetic acid, like abscisic acid, acts as a negative regulator of plant defense. Fructose concentrations increased in second, fourth, eight days after treatment with pathogen, but there was a decrease in tenth days. However, maltose levels decreased in all the periods after inoculation with the pathogen bacterium comparing to the control healthy plants. These results were also affirmed to the reduction in the total contents of chlorophyll and an increase of total carotenoids in the bacterium infected-plants. The investigation confirmed that there are complex relationships among trace element levels, endogenous plant hormone and sugar in the regulation of defense mechanisms against attacks by bacterial pathogens.
Use of the Different Polyacrylamide Gel Electrophoresis (Page) Methods in the Characterization of Human Pathogenic Staphylococcus Aureus Strains
(Chemical Publishing Co., 2010) Berber, I.; Alan, N.; Ekin, S.; Onlu, H.
In the study, a total of 41 strains of Staphylococcus aureus including 38 clinical isolates and 3 reference strains were characterized according to biotyping, plasmid profiles and the numerical analysis of the protein profiles. The antibiogram results showed that the isolates were resistant against the tested antibiotics, except for vancomycin. Furthermore, plasmid profile analysis confirmed that the strains consisted of only one plasmid. Present findings indicated that the whole-cell and extracellular protein profiles obtained by using SDS-PAGE methods to be good typing tool for the differentiation of S. aureus strains at the species level, not strain level. However, Native-PAGE of whole-cell proteins was the most reliable and rapid method for differentiation between MRSA and ordinary S. aureus strains comparing to other applying PAGE techniques. In addition, it was determined that the same clone was responsible for most cases of MRSA and other S. aureus epidemic among surveyed hospitals. In conclusion, this study supposed that together application at least two different polyacrylamide gel electrophoresis (PAGE) techniques can be offer accurate and an effective approach to the investigation of taxonomic relationships within human pathogenic S. aureus strains.